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Title:Near-lossless EEG signal compression using a convolutional autoencoder : case study for 256-channel binocular rivalry dataset
Authors:ID Kukrál, Martin (Author)
ID Duc Pham, Tien (Author)
ID Kohout, Josef (Author)
ID Kohek, Štefan (Author)
ID Havlík, Marek (Author)
ID Grygarová, Dominika (Author)
ID Kohek, Štefan (Copyright holder)
Files:.pdf Near-lossless_EEG_accepted_manuscript.pdf (4,18 MB)
MD5: EFCDE7C6E0531D5F2213AA9341E100DF
 
URL https://www.sciencedirect.com/science/article/abs/pii/S0010482525002392
 
Language:English
Work type:Not categorized
Typology:1.01 - Original Scientific Article
Organization:FERI - Faculty of Electrical Engineering and Computer Science
Abstract:Electroencephalography (EEG) experiments typically generate vast amounts of data due to the high sampling rates and the use of multiple electrodes to capture brain activity. Consequently, storing and transmitting these large datasets is challenging, necessitating the creation of specialized compression techniques tailored to this data type. This study proposes one such method, which at its core uses an artificial neural network (specifically a convolutional autoencoder) to learn the latent representations of modelled EEG signals to perform lossy compression, which gets further improved with lossless corrections based on the user-defined threshold for the maximum tolerable amplitude loss, resulting in a flexible near-lossless compression scheme. To test the viability of our approach, a case study was performed on the 256-channel binocular rivalry dataset, which also describes mostly data-specific statistical analyses and preprocessing steps. Compression results, evaluation metrics, and comparisons with baseline general compression methods suggest that the proposed method can achieve substantial compression results and speed, making it one of the potential research topics for follow-up studies.
Keywords:EEG signals, electroencephalography, compression results
Publication status:Not published
Publication version:Author Accepted Manuscript
Submitted for review:23.09.2024
Article acceptance date:15.02.2025
Publication date:05.05.2025
Number of pages:17 str.
Numbering:Vol. 189, [article no.] 109888
PID:20.500.12556/DKUM-100116 New window
UDC:004.9
ISSN on article:1879-0534
COBISS.SI-ID:228270083 New window
DOI:10.1016/j.compbiomed.2025.109888 New window
Publication date in DKUM:08.09.2026
Views:167
Downloads:6
Metadata:XML DC-XML DC-RDF
Categories:Misc.
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Document is financed by a project

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:J2-4458
Name:Paradigma stiskanja podatkov z odstranjevanjem obnovljivih informacij
Acronym:COMPROMISE

Funder:GAČR - Czech Science Foundation
Project number:23-04622L
Name:Data compression paradigm based on omitting self-evident information
Acronym:COMPROMISE

Funder:Ministry of Education, Youth and Sports of the Czech Republic
Project number:SGS-2022-015
Name:New Methods for Medical, Spatial and Communication Data

Licences

License:CC BY-NC-ND 4.0, Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
Link:http://creativecommons.org/licenses/by-nc-nd/4.0/
Description:The most restrictive Creative Commons license. This only allows people to download and share the work for no commercial gain and for no other purposes.

Secondary language

Language:Slovenian
Abstract:Poskusi elektroencefalografije (EEG) običajno ustvarijo ogromne količine podatkov zaradi visokih frekvenc vzorčenja in uporabe več elektrod za zajemanje možganske aktivnosti. Posledično je shranjevanje in prenos teh velikih naborov podatkov zahteven, kar zahteva ustvarjanje specializiranih tehnik stiskanja, prilagojenih tej vrsti podatkov. Ta študija predlaga eno takšnih metod, ki v svojem jedru uporablja umetno nevronsko mrežo (natančneje konvolucijski avtoenkoder) za učenje latentnih predstavitev modeliranih EEG signalov za izvajanje stiskanja z izgubami, ki se dodatno izboljša z brezizgubnimi popravki, ki temeljijo na uporabniško določenem pragu za največjo dovoljeno izgubo amplitude, kar ima za posledico prilagodljivo shemo stiskanja skoraj brez izgub. Za preizkus izvedljivosti našega pristopa je bila izvedena študija primera na 256-kanalnem naboru podatkov o binokularnem rivalstvu, ki opisuje tudi večinoma statistične analize in korake predobdelave, specifične za podatke. Rezultati stiskanja, metrike vrednotenja in primerjave z osnovnimi splošnimi metodami stiskanja kažejo, da lahko predlagana metoda doseže občutne rezultate stiskanja in hitrost, zaradi česar je ena od potencialnih raziskovalnih tem za nadaljnje študije.
Keywords:elektroencefalografski signali, podatki, stiskanje podatkov, izgube


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