| Title: | Optimizacija zvijanja proteinov znotraj kubične mreže s pomočjo evolucijskega algoritma in grafične procesne enote : diplomsko delo |
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| Authors: | ID Vipotnik, Matic (Author)
ID Bošković, Borko (Mentor) More about this mentor... 
ID Brest, Janez (Comentor) |
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| Files: |  UN_Vipotnik_Matic_2020.pdf (748,33 KB)
MD5: EAF18D2F2C2BACDC1E62C782074A8AD5
PID: 20.500.12556/dkum/06f10b27-1a81-4cbf-b79b-463fe0add4cf
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| Language: | Slovenian |
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| Work type: | Bachelor thesis/paper |
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| Typology: | 2.11 - Undergraduate Thesis |
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| Organization: | FERI - Faculty of Electrical Engineering and Computer Science
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| Abstract: | V diplomskem delu smo implementirali algoritem za optimizacijo zvijanja proteinov znotraj modela HP. Algoritem na centralno procesni enoti porabi veliko časa, da protein zvije v optimalno strukturo. Zato smo algoritem prilagodili, da se izvaja na grafični procesni enoti. Učinkovitost algoritma smo analizirali na znanih sekvencah iz literature. S pomočjo algoritma, ki se je izvajal na grafični procesni enoti smo v povprečju dosegli 10,2 - kratno pohitritev v primerjavi z algoritmom, ki se izvaja na centralno procesni enoti. |
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| Keywords: | zvijanje proteinov, CUDA, optimizacija, evolucijski algoritem |
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| Place of publishing: | Maribor |
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| Place of performance: | Maribor |
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| Publisher: | [M. Vipotnik] |
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| Year of publishing: | 2020 |
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| Number of pages: | X, 30 f. |
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| PID: | 20.500.12556/DKUM-77845 |
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| UDC: | 004.318.021(043.2) |
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| COBISS.SI-ID: | 35582723 |
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| NUK URN: | URN:SI:UM:DK:ZSNWYAFN |
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| Publication date in DKUM: | 03.11.2020 |
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| Views: | 1358 |
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| Downloads: | 117 |
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| Metadata: |    |
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| Categories: | KTFMB - FERI
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