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Title:Negative-control-anchored urinary microbiome profiling with absolute 16S quantification : a pilot study in newly diagnosed, treatment-naive bladder cancer and healthy individuals
Authors:ID Accetto, Tomaž (Author)
ID Strašek Smrdel, Katja (Author)
ID Taskovska, Milena (Author)
ID Starčič Erjavec, Marjanca (Author)
ID Smrkolj, Tomaž (Author)
ID Seme, Katja (Author)
ID Erdani-Kreft, Mateja (Author)
Files:.pdf RAZ_Accetto_Tomaz_2026.pdf (1006,45 KB)
MD5: AE085487BCCD4F646C4BB17A72C11299
 
URL https://doi.org/10.1093/femsle/fnag020
 
Language:English
Work type:Scientific work
Typology:1.01 - Original Scientific Article
Organization:FNM - Faculty of Natural Sciences and Mathematics
Keywords:bladder cancer, midstream urine, microbiota, urinary tract infection, next-generation sequencing, nonmetric multidimensional scaling, absolute quantification, negative controls, low biomass
Publication status:Published
Publication version:Version of Record
Article acceptance date:06.02.2026
Publication date:17.02.2026
Publisher:Oxford University Press
Year of publishing:2026
Number of pages:8 str.
Numbering:Letn. 373, št. članka fnag020
PID:20.500.12556/DKUM-97559 New window
UDC:579:616.6
ISSN on article:0378-1097
COBISS.SI-ID:272226819 New window
DOI:10.1093/femsle/fnag020 New window
Publication date in DKUM:19.03.2026
Views:115
Downloads:1
Metadata:XML DC-XML DC-RDF
Categories:Misc.
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Record is a part of a journal

Title:FEMS microbiology letters
Shortened title:FEMS microbiol. lett.
Publisher:Elsevier
ISSN:0378-1097
COBISS.SI-ID:25455104 New window

Document is financed by a project

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:J7-2594-2020
Name:Uporaba amnijske membrane za inovativno multimodalno zdravljenje bakterijskega cistitisa in raka sečnega mehurja: učinek njene protimikrobne, imunomodulatorne in protirakave aktivnosti

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:P3-0108-2018
Name:Celična biologija in molekularna genetika v biomedicini

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:MRIC UL IP-0510
Name:Mreža raziskovalnih infrastrukturnih centrov
Acronym:MRIC UL

Funder:Other - Other funder or multiple funders
Funding programme:Ministrstvo za izobraževanje, znanost in šport Republike Slovenije
Project number:MIZS
Name:ELIXIR
Acronym:RI-SI-ELIXIR 2

Licences

License:CC BY 4.0, Creative Commons Attribution 4.0 International
Link:http://creativecommons.org/licenses/by/4.0/
Description:This is the standard Creative Commons license that gives others maximum freedom to do what they want with the work as long as they credit the author.
Licensing start date:17.02.2026

Secondary language

Language:Slovenian
Keywords:rak mehurja, srednji tok urina, mikrobiota, okužba sečil, sekvenciranje naslednje generacije, nemetrično večdimenzionalno skaliranje, absolutna kvantifikacija, negativne kontrole, nizka biomasa


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